Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid resistance transcriptional activator gade | FGC38_RS18720 | Not Available | Positive | 3791254 - 3791781 | 20600.6 |
| hypothetical protein | FGC38_RS18725 | Not Available | Negative | 3791782 - 3792060 | 9789.79 |
| multidrug transporter subunit mdte | FGC38_RS18730 | Not Available | Positive | 3792168 - 3793277 | 39309.4 |
| multidrug efflux pump rnd permease mdtf | FGC38_RS18735 | Not Available | Positive | 3793302 - 3796415 | 111524.0 |
| acid resistance transcriptional activator gadw | FGC38_RS18740 | Not Available | Negative | 3796778 - 3797506 | 28030.0 |
| acid resistance transcriptional activator gadx | FGC38_RS18745 | Not Available | Negative | 3797874 - 3798698 | 31564.3 |
| glutamate decarboxylase | FGC38_RS18750 | Not Available | Negative | 3799068 - 3800468 | 52688.0 |
| cytochrome c peroxidase | FGC38_RS18755 | Not Available | Negative | 3800679 - 3802076 | 51573.3 |
| alpha,alpha-trehalase | FGC38_RS18760 | Not Available | Positive | 3802480 - 3804129 | 63700.1 |
| helix-turn-helix transcriptional regulator | FGC38_RS18765 | Not Available | Negative | 3804180 - 3804782 | 22605.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





