Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FGC38_RS23585 | Not Available | Negative | 3773500 - 3773553 | 2065.58 |
| protein yrib | FGC38_RS23720 | Not Available | Negative | 3773531 - 3773584 | 1904.39 |
| dipeptide/tripeptide permease dtpb | FGC38_RS18630 | Not Available | Positive | 3773750 - 3775219 | 53578.4 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | FGC38_RS18635 | Not Available | Negative | 3775268 - 3776020 | 26950.8 |
| oligopeptidase a | FGC38_RS18640 | Not Available | Negative | 3776028 - 3778070 | 77171.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase | FGC38_RS18645 | Not Available | Positive | 3778273 - 3779115 | 31943.6 |
| glutathione-disulfide reductase | FGC38_RS18650 | Not Available | Positive | 3779187 - 3780539 | 48775.3 |
| damage-inducible type i toxin dinq | FGC38_RS18655 | Not Available | Negative | 3780593 - 3780676 | 3021.06 |
| as(iii)-sensing metalloregulatory transcriptional repressor arsr | FGC38_RS18660 | Not Available | Positive | 3781416 - 3781769 | 13253.3 |
| arsenite/antimonite:h(+) antiporter arsb | FGC38_RS18665 | Not Available | Positive | 3781823 - 3783112 | 45500.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





