Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter permease livh | FGC38_RS18435 | Not Available | Negative | 3728365 - 3729291 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | FGC38_RS18440 | Not Available | Negative | 3729339 - 3730448 | 39380.9 |
| aspartate 1-decarboxylase autocleavage activator panm | FGC38_RS18445 | Not Available | Positive | 3730872 - 3731255 | 14506.4 |
| branched chain amino acid abc transporter substrate-binding protein livj | FGC38_RS18450 | Not Available | Negative | 3731443 - 3732546 | 39078.5 |
| rna polymerase sigma factor rpoh | FGC38_RS18455 | Not Available | Negative | 3732817 - 3733671 | 32470.6 |
| permease-like cell division protein ftsx | FGC38_RS18460 | Not Available | Negative | 3733916 - 3734974 | 38545.9 |
| cell division atp-binding protein ftse | FGC38_RS18465 | Not Available | Negative | 3734967 - 3735635 | 24440.8 |
| signal recognition particle-docking protein ftsy | FGC38_RS18470 | Not Available | Negative | 3735638 - 3737131 | 54516.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | FGC38_RS18475 | Not Available | Positive | 3737281 - 3737877 | 21678.8 |
| duf1145 family protein | FGC38_RS18480 | Not Available | Positive | 3737867 - 3738136 | 10252.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





