Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator frlr | FGC38_RS18030 | Not Available | Positive | 3636939 - 3637670 | 27822.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | FGC38_RS18035 | Not Available | Negative | 3637822 - 3638907 | 38601.7 |
| yhft family protein | FGC38_RS18040 | Not Available | Negative | 3638919 - 3640223 | 46519.2 |
| duf2620 domain-containing protein | FGC38_RS18045 | Not Available | Negative | 3640235 - 3640588 | 12479.5 |
| phosphotriesterase-related protein | FGC38_RS18050 | Not Available | Negative | 3640599 - 3641477 | 32917.4 |
| phosphopentomutase | FGC38_RS18055 | Not Available | Negative | 3641474 - 3642700 | 44562.2 |
| yhfx family plp-dependent enzyme | FGC38_RS18060 | Not Available | Negative | 3642700 - 3643863 | 42296.8 |
| prd domain protein | FGC38_RS18065 | Not Available | Negative | 3643947 - 3644309 | 13528.5 |
| gntr family transcriptional regulator yhfz | FGC38_RS18070 | Not Available | Negative | 3644326 - 3645231 | 33506.4 |
| tryptophan--trna ligase | FGC38_RS18080 | Not Available | Negative | 3645521 - 3646525 | 37439.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





