Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system secretin gspd | FGC38_RS17780 | Not Available | Positive | 3589264 - 3591216 | 70702.2 |
| type ii secretion system atpase gspe | FGC38_RS17785 | Not Available | Positive | 3591226 - 3592707 | 54613.9 |
| type ii secretion system inner membrane protein gspf | FGC38_RS17790 | Not Available | Positive | 3592704 - 3593900 | 44341.9 |
| type ii secretion system major pseudopilin gspg | FGC38_RS17795 | Not Available | Positive | 3593910 - 3594347 | 15906.1 |
| type ii secretion system minor pseudopilin gsph | FGC38_RS17800 | Not Available | Positive | 3594355 - 3594864 | 18566.1 |
| type ii secretion system minor pseudopilin gspi | FGC38_RS17805 | Not Available | Positive | 3594861 - 3595238 | 13902.2 |
| type ii secretion system minor pseudopilin gspj | FGC38_RS17810 | Not Available | Positive | 3595231 - 3595818 | 22232.5 |
| type ii secretion system minor pseudopilin gspk | FGC38_RS17815 | Not Available | Positive | 3595811 - 3596794 | 37648.7 |
| type ii secretion system protein gspl | FGC38_RS17820 | Not Available | Positive | 3596809 - 3597972 | 44542.3 |
| type ii secretion system protein gspm | FGC38_RS17825 | Not Available | Positive | 3597969 - 3598430 | 17234.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





