Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-protecting protein dpra | FGC38_RS17580 | Not Available | Negative | 3565323 - 3566447 | 40957.3 |
| peptide deformylase | FGC38_RS17585 | Not Available | Positive | 3566577 - 3567086 | 19329.6 |
| methionyl-trna formyltransferase | FGC38_RS17590 | Not Available | Positive | 3567101 - 3568048 | 34170.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | FGC38_RS17595 | Not Available | Positive | 3568094 - 3569383 | 48350.3 |
| trk system potassium transporter trka | FGC38_RS17600 | Not Available | Positive | 3569405 - 3570781 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | FGC38_RS17605 | Not Available | Positive | 3570911 - 3571321 | 14957.7 |
| alternative ribosome-rescue factor arfa | FGC38_RS17610 | Not Available | Negative | 3571318 - 3571536 | 8171.86 |
| zn(2+)-responsive transcriptional regulator | FGC38_RS17615 | Not Available | Negative | 3571592 - 3572017 | 16180.4 |
| duf1992 domain-containing protein | FGC38_RS17620 | Not Available | Negative | 3572028 - 3572396 | 13945.5 |
| 50s ribosomal protein l17 | FGC38_RS17625 | Not Available | Negative | 3572503 - 3572886 | 14365.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





