Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 3556767 - 3559670 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3559845 - 3559920 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3559963 - 3560039 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3560108 - 3561649 | Not Available |
| gamma carbonic anhydrase family protein | FGC38_RS17550 | Not Available | Positive | 3562123 - 3562677 | 20246.3 |
| duf1488 domain-containing protein | FGC38_RS17555 | Not Available | Negative | 3562653 - 3562910 | 10007.5 |
| shikimate dehydrogenase | FGC38_RS17560 | Not Available | Negative | 3562907 - 3563725 | 29415.3 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | FGC38_RS17565 | Not Available | Negative | 3563730 - 3564302 | 20768.9 |
| type i dna topoisomerase | FGC38_RS17570 | Not Available | Negative | 3564307 - 3564849 | 19872.0 |
| duf494 family protein smg | FGC38_RS17575 | Not Available | Negative | 3564878 - 3565351 | 18511.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





