Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator aaer | FGC38_RS17375 | Not Available | Positive | 3522407 - 3523336 | 34518.1 |
| metalloprotease tldd | FGC38_RS17380 | Not Available | Negative | 3523470 - 3524915 | 51367.2 |
| asma2 domain-containing protein yhdp | FGC38_RS17385 | Not Available | Negative | 3525345 - 3529145 | 139061.0 |
| ribonuclease g | FGC38_RS17390 | Not Available | Negative | 3529213 - 3530682 | 55367.4 |
| nucleoside triphosphate pyrophosphatase yhde | FGC38_RS17395 | Not Available | Negative | 3530672 - 3531265 | 21516.7 |
| rod shape-determining protein mred | FGC38_RS17400 | Not Available | Negative | 3531274 - 3531762 | 18788.9 |
| rod shape-determining protein mrec | FGC38_RS17405 | Not Available | Negative | 3531762 - 3532865 | 39532.8 |
| rod shape-determining protein mreb | FGC38_RS17410 | Not Available | Negative | 3532931 - 3533974 | 36954.7 |
| rnase e specificity factor csrd | FGC38_RS17415 | Not Available | Negative | 3534279 - 3536219 | 73343.7 |
| mdr family oxidoreductase | FGC38_RS17420 | Not Available | Positive | 3536371 - 3537345 | 34725.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





