Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid asymmetry maintenance abc transporter permease subunit mlae | FGC38_RS17125 | Not Available | Negative | 3471353 - 3472135 | 27865.0 |
| phospholipid abc transporter atp-binding protein mlaf | FGC38_RS17130 | Not Available | Negative | 3472143 - 3472952 | 29098.6 |
| calcium/sodium antiporter | FGC38_RS17135 | Not Available | Positive | 3473162 - 3474139 | 34742.9 |
| arabinose-5-phosphate isomerase kdsd | FGC38_RS17140 | Not Available | Positive | 3474153 - 3475139 | 35198.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | FGC38_RS17145 | Not Available | Positive | 3475160 - 3475726 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | FGC38_RS17150 | Not Available | Positive | 3475723 - 3476298 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | FGC38_RS17155 | Not Available | Positive | 3476267 - 3476824 | 20128.1 |
| lps export abc transporter atp-binding protein | FGC38_RS17160 | Not Available | Positive | 3476831 - 3477556 | 26802.3 |
| rna polymerase factor sigma-54 | FGC38_RS17165 | Not Available | Positive | 3477604 - 3479037 | 53992.8 |
| ribosome hibernation promoting factor | FGC38_RS17170 | Not Available | Positive | 3479060 - 3479347 | 10750.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





