Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate kinase | FGC38_RS16730 | Not Available | Negative | 3395339 - 3396547 | 43386.7 |
| threonine/serine transporter tdcc | FGC38_RS16735 | Not Available | Negative | 3396573 - 3397904 | 48881.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | FGC38_RS16740 | Not Available | Negative | 3397926 - 3398915 | 35234.5 |
| transcriptional regulator tdca | FGC38_RS16745 | Not Available | Negative | 3399014 - 3399952 | 34540.9 |
| transcriptional activator tdcr | FGC38_RS23570 | Not Available | Positive | 3400267 - 3400485 | 8608.28 |
| protein yhab | FGC38_RS16755 | Not Available | Positive | 3400741 - 3401280 | 20577.6 |
| yhac family protein | FGC38_RS16760 | Not Available | Positive | 3401302 - 3402489 | 45253.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 3403103 - 3403479 | Not Available |
| glycerate 2-kinase | FGC38_RS16770 | Not Available | Negative | 3403512 - 3404657 | 39106.7 |
| 2-hydroxy-3-oxopropionate reductase | FGC38_RS16775 | Not Available | Negative | 3404754 - 3405644 | 30661.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





