Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf805 domain-containing protein | FGC38_RS16680 | Not Available | Positive | 3385191 - 3385556 | 14281.7 |
| duf805 domain-containing protein | FGC38_RS16685 | Not Available | Positive | 3385798 - 3386154 | 13456.7 |
| dna-binding transcriptional regulator yhaj | FGC38_RS16690 | Not Available | Negative | 3386205 - 3387101 | 33258.3 |
| pirin family protein | FGC38_RS16695 | Not Available | Positive | 3387206 - 3387907 | 25897.0 |
| protein yhal | FGC38_RS16700 | Not Available | Positive | 3387930 - 3388094 | 5961.16 |
| cysteine desulfidase | FGC38_RS16705 | Not Available | Negative | 3388228 - 3389538 | 45363.8 |
| amino acid permease | FGC38_RS16710 | Not Available | Negative | 3389566 - 3390897 | 48317.6 |
| l-serine ammonia-lyase | FGC38_RS16715 | Not Available | Negative | 3391172 - 3392536 | 48524.6 |
| enamine/imine deaminase | FGC38_RS16720 | Not Available | Negative | 3392608 - 3392997 | 14008.0 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | FGC38_RS16725 | Not Available | Negative | 3393011 - 3395305 | 85940.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





