Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator exur | FGC38_RS16635 | Not Available | Positive | 3379539 - 3380315 | 29837.3 |
| protein yqim | FGC38_RS23565 | Not Available | Positive | 3380555 - 3380638 | 3305.08 |
| deda family general envelope maintenance protein yqja | FGC38_RS16640 | Not Available | Positive | 3380660 - 3381322 | 24587.0 |
| envz/ompr regulon moderator mzra | FGC38_RS16645 | Not Available | Positive | 3381326 - 3381709 | 14173.0 |
| duf1090 family protein yqjc | FGC38_RS16650 | Not Available | Positive | 3381856 - 3382224 | 13906.4 |
| duf883 family protein | FGC38_RS16655 | Not Available | Positive | 3382262 - 3382567 | 11052.1 |
| phage holin family protein | FGC38_RS16660 | Not Available | Positive | 3382570 - 3382974 | 15148.0 |
| yqjk-like family protein | FGC38_RS16665 | Not Available | Positive | 3382964 - 3383263 | 11811.4 |
| doxx family protein | FGC38_RS16670 | Not Available | Positive | 3383449 - 3383841 | 14102.8 |
| glutathionyl-hydroquinone reductase yqjg | FGC38_RS16675 | Not Available | Positive | 3383911 - 3384897 | 37388.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





