Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane channel protein tolc | FGC38_RS16340 | Not Available | Positive | 3311003 - 3312484 | 53743.7 |
| duf1190 family protein | FGC38_RS16345 | Not Available | Positive | 3312632 - 3313303 | 23480.7 |
| glutathionylspermidine synthase family protein | FGC38_RS16350 | Not Available | Positive | 3313309 - 3314469 | 45028.4 |
| 4,5-dopa dioxygenase extradiol | FGC38_RS16355 | Not Available | Negative | 3314507 - 3315295 | 28893.7 |
| zinc transporter zupt | FGC38_RS16360 | Not Available | Positive | 3315438 - 3316211 | 26486.5 |
| protein yqid | FGC38_RS23430 | Not Available | Negative | 3316269 - 3316439 | 6810.31 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | FGC38_RS16365 | Not Available | Negative | 3316701 - 3317354 | 23354.9 |
| ubiquinone biosynthesis accessory factor ubik | FGC38_RS16370 | Not Available | Positive | 3317728 - 3318018 | 11276.7 |
| fimbrial-like protein | FGC38_RS16375 | Not Available | Positive | 3318302 - 3318853 | 19495.1 |
| is3-like element is2 family transposase | FGC38_RS16380 | Not Available | Positive | 3319075 - 3320303 | 46430.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





