Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quorum sensing response regulator transcription factor qseb | FGC38_RS16290 | Not Available | Positive | 3302716 - 3303375 | 24679.1 |
| quorum sensing histidine kinase qsec | FGC38_RS16295 | Not Available | Positive | 3303372 - 3304721 | 50284.7 |
| duf2645 family protein | FGC38_RS16300 | Not Available | Negative | 3304767 - 3305099 | 13201.7 |
| nadph:quinone oxidoreductase mdab | FGC38_RS16305 | Not Available | Positive | 3305418 - 3305999 | 21892.1 |
| putative quinol monooxygenase | FGC38_RS16310 | Not Available | Positive | 3306030 - 3306344 | 11533.1 |
| dna topoisomerase iv subunit b | FGC38_RS16315 | Not Available | Negative | 3306392 - 3308284 | 70247.9 |
| esterase yqia | FGC38_RS16320 | Not Available | Negative | 3308313 - 3308894 | 21642.7 |
| 3',5'-cyclic-amp phosphodiesterase | FGC38_RS16325 | Not Available | Negative | 3308894 - 3309721 | 30939.7 |
| duf1249 family protein | FGC38_RS16330 | Not Available | Negative | 3309746 - 3310168 | 16549.0 |
| adp-ribose diphosphatase | FGC38_RS16335 | Not Available | Negative | 3310169 - 3310798 | 23668.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





