Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system aminomethyltransferase gcvt | FGC38_RS15715 | Not Available | Negative | 3182462 - 3183556 | 40149.1 |
| protein yqfi | FGC38_RS15720 | Not Available | Positive | 3183847 - 3183930 | 3190.92 |
| fad-dependent 2-octaprenylphenol hydroxylase | FGC38_RS15725 | Not Available | Negative | 3184004 - 3185206 | 44247.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | FGC38_RS15730 | Not Available | Negative | 3185229 - 3186407 | 42290.8 |
| xaa-pro aminopeptidase | FGC38_RS15735 | Not Available | Negative | 3186404 - 3187729 | 49818.3 |
| upf0149 family protein ygfb | FGC38_RS15740 | Not Available | Negative | 3187755 - 3188333 | 21230.8 |
| cell division protein zapa | FGC38_RS15745 | Not Available | Positive | 3188501 - 3188830 | 12594.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3188872 - 3189055 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | FGC38_RS15755 | Not Available | Positive | 3189076 - 3189678 | 23242.3 |
| type i toxin-antitoxin system toxin ibsc | FGC38_RS15760 | Not Available | Negative | 3189779 - 3189838 | 2209.04 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





