Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent uric acid utilization protein ygft | FGC38_RS15615 | Not Available | Negative | 3161901 - 3163820 | 69092.8 |
| urate/proton symporter uact | FGC38_RS15620 | Not Available | Positive | 3164256 - 3165704 | 51761.4 |
| protein yqfg | FGC38_RS15625 | Not Available | Positive | 3165706 - 3165831 | 4791.29 |
| protein yqfh | FGC38_RS15630 | Not Available | Negative | 3165828 - 3165899 | 2617.29 |
| isopentenyl-diphosphate delta-isomerase | FGC38_RS15635 | Not Available | Positive | 3165954 - 3166502 | 20509.3 |
| lysine--trna ligase | FGC38_RS15640 | Not Available | Negative | 3166546 - 3168063 | 57606.8 |
| peptide chain release factor 2 | FGC38_RS15645 | Not Available | Negative | 3168073 - 3169171 | 41253.0 |
| single-stranded-dna-specific exonuclease recj | FGC38_RS15650 | Not Available | Negative | 3169262 - 3170995 | 63392.7 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | FGC38_RS15655 | Not Available | Negative | 3171001 - 3171711 | 25623.1 |
| site-specific tyrosine recombinase xerd | FGC38_RS15660 | Not Available | Negative | 3171736 - 3172632 | 34248.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





