Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | FGC38_RS15420 | Not Available | Positive | 3118736 - 3119965 | 45101.9 |
| helix-turn-helix transcriptional regulator | FGC38_RS15425 | Not Available | Positive | 3120425 - 3121057 | 24288.2 |
| winged helix-turn-helix domain-containing protein | FGC38_RS15430 | Not Available | Positive | 3121391 - 3122200 | 30851.9 |
| protein yqej | FGC38_RS15435 | Not Available | Positive | 3122193 - 3122675 | 18720.5 |
| hypothetical protein | FGC38_RS15440 | Not Available | Negative | 3122708 - 3122788 | 3202.9 |
| protein yqek | FGC38_RS15445 | Not Available | Negative | 3122824 - 3123249 | 16272.4 |
| hypothetical protein | FGC38_RS15450 | Not Available | Positive | 3123443 - 3123932 | 18527.3 |
| tetratricopeptide repeat protein | FGC38_RS15455 | Not Available | Positive | 3124157 - 3124648 | 19094.2 |
| hila family transcriptional regulator ygeh | FGC38_RS15460 | Not Available | Positive | 3124983 - 3126359 | 52755.8 |
| protein ygei | FGC38_RS15465 | Not Available | Positive | 3126527 - 3126745 | 8055.23 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





