Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cas7/cse4/casc | FGC38_RS14960 | Not Available | Negative | 3012604 - 3013695 | 40027.8 |
| type i-e crispr-associated protein cse2/casb | FGC38_RS14965 | Not Available | Negative | 3013708 - 3014190 | 18702.6 |
| type i-e crispr-associated protein cse1/casa | FGC38_RS14970 | Not Available | Negative | 3014183 - 3015691 | 55904.4 |
| crispr-associated helicase/endonuclease cas3 | FGC38_RS14975 | Not Available | Negative | 3016106 - 3018772 | 100550.0 |
| phosphoadenosine phosphosulfate reductase | FGC38_RS14985 | Not Available | Negative | 3019131 - 3019865 | 27977.3 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | FGC38_RS14990 | Not Available | Negative | 3019940 - 3021652 | 64001.8 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | FGC38_RS14995 | Not Available | Negative | 3021652 - 3023451 | 66273.4 |
| 6-carboxytetrahydropterin synthase qued | FGC38_RS15000 | Not Available | Positive | 3023770 - 3024132 | 13642.4 |
| fad-dependent oxidoreductase | FGC38_RS15005 | Not Available | Positive | 3024210 - 3025481 | 46395.9 |
| ferredoxin family protein | FGC38_RS15010 | Not Available | Positive | 3025472 - 3025732 | 9662.52 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





