Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase ygap | FGC38_RS14510 | Not Available | Positive | 2929073 - 2929597 | 18639.8 |
| dna-binding protein stpa | FGC38_RS14515 | Not Available | Negative | 2929644 - 2930048 | 15348.4 |
| l-alanine exporter alae | FGC38_RS14520 | Not Available | Positive | 2930717 - 2931166 | 16950.0 |
| duf2002 family protein | FGC38_RS14525 | Not Available | Negative | 2931203 - 2931547 | 13066.5 |
| duf883 domain-containing protein | FGC38_RS14530 | Not Available | Positive | 2931699 - 2932028 | 11847.9 |
| glutaredoxin-like protein nrdh | FGC38_RS14535 | Not Available | Positive | 2932276 - 2932521 | 9139.98 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | FGC38_RS14540 | Not Available | Positive | 2932518 - 2932928 | 15341.3 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | FGC38_RS14545 | Not Available | Positive | 2932901 - 2935045 | 80483.5 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | FGC38_RS14550 | Not Available | Positive | 2935055 - 2936014 | 36445.1 |
| glycine betaine/l-proline abc transporter atp-binding protein prov | FGC38_RS14555 | Not Available | Positive | 2936368 - 2937570 | 44165.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





