Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FGC38_RS23410 | Not Available | Positive | 2917950 - 2920202 | 84672.6 |
| glutarate dioxygenase glah | FGC38_RS14465 | Not Available | Positive | 2920538 - 2921515 | 37362.5 |
| l-2-hydroxyglutarate oxidase | FGC38_RS14470 | Not Available | Positive | 2921535 - 2922803 | 46084.6 |
| nadp-dependent succinate-semialdehyde dehydrogenase | FGC38_RS14475 | Not Available | Positive | 2922826 - 2924274 | 51723.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | FGC38_RS14480 | Not Available | Positive | 2924288 - 2925568 | 45777.3 |
| gaba permease | FGC38_RS14485 | Not Available | Positive | 2925806 - 2927206 | 51083.1 |
| dna-binding transcriptional regulator csir | FGC38_RS14490 | Not Available | Positive | 2927227 - 2927889 | 24992.3 |
| potassium binding protein kbp | FGC38_RS14495 | Not Available | Negative | 2927890 - 2928339 | 16064.0 |
| yqae/pmp3 family membrane protein | FGC38_RS14500 | Not Available | Negative | 2928423 - 2928581 | 5865.57 |
| arsr/smtb family transcription factor | FGC38_RS14505 | Not Available | Positive | 2928764 - 2929063 | 10596.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





