Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | FGC38_RS14305 | Not Available | Positive | 2887712 - 2888953 | 46654.3 |
| protein yfjh | FGC38_RS14310 | Not Available | Negative | 2889197 - 2890153 | 37141.4 |
| dna-binding transcriptional activator alpa | FGC38_RS14315 | Not Available | Positive | 2890197 - 2890409 | 8133.06 |
| yfji family protein | FGC38_RS14320 | Not Available | Positive | 2890538 - 2891947 | 54029.6 |
| inovirus gp2 family protein | FGC38_RS14325 | Not Available | Positive | 2892100 - 2892726 | 24562.0 |
| dead/deah box helicase | FGC38_RS14330 | Not Available | Negative | 2892904 - 2895093 | 83066.5 |
| anti-bacteriophage protein abpa | FGC38_RS14335 | Not Available | Negative | 2895090 - 2896706 | 62009.8 |
| duf1524 domain-containing protein | FGC38_RS14340 | Not Available | Negative | 2897066 - 2897329 | 9967.83 |
| type ii toxin-antitoxin system toxin mrna endoribonuclease rnla | FGC38_RS14345 | Not Available | Positive | 2897471 - 2898544 | 40063.5 |
| type ii toxin-antitoxin system antitoxin rnlb | FGC38_RS14350 | Not Available | Positive | 2898537 - 2898908 | 13665.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





