Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 2860922 - 2860997 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2861169 - 2862710 | Not Available |
| atp-dependent chaperone clpb | FGC38_RS14165 | Not Available | Negative | 2863153 - 2865726 | 95590.8 |
| purine nucleoside phosphorylase yfih | FGC38_RS14170 | Not Available | Negative | 2865856 - 2866587 | 26340.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | FGC38_RS14175 | Not Available | Negative | 2866584 - 2867564 | 37123.9 |
| outer membrane protein assembly factor bamd | FGC38_RS14180 | Not Available | Positive | 2867699 - 2868436 | 27830.9 |
| ribosome-associated translation inhibitor raia | FGC38_RS14185 | Not Available | Positive | 2868707 - 2869048 | 12785.3 |
| phe operon leader peptide | FGC38_RS14190 | Not Available | Positive | 2869152 - 2869199 | 1924.41 |
| bifunctional chorismate mutase/prephenate dehydratase | FGC38_RS14195 | Not Available | Positive | 2869298 - 2870458 | 43113.9 |
| bifunctional chorismate mutase/prephenate dehydrogenase | FGC38_RS14200 | Not Available | Negative | 2870501 - 2871622 | 42045.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





