Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | FGC38_RS13910 | Not Available | Positive | 2804900 - 2805322 | 15212.3 |
| aldose 1-epimerase | FGC38_RS13915 | Not Available | Negative | 2805370 - 2806242 | 32718.1 |
| zinc-dependent alcohol dehydrogenase family protein | FGC38_RS13920 | Not Available | Negative | 2806254 - 2807348 | 39355.7 |
| abc transporter permease | FGC38_RS13925 | Not Available | Negative | 2807381 - 2808379 | 34485.6 |
| sugar abc transporter atp-binding protein | FGC38_RS13930 | Not Available | Negative | 2808404 - 2809915 | 55019.8 |
| substrate-binding domain-containing protein | FGC38_RS13935 | Not Available | Negative | 2809938 - 2810921 | 35060.2 |
| duf5107 domain-containing protein | FGC38_RS13940 | Not Available | Negative | 2811018 - 2814299 | 123839.0 |
| rok family protein | FGC38_RS13945 | Not Available | Positive | 2814417 - 2815610 | 44523.2 |
| hypothetical protein | FGC38_RS23840 | Not Available | Negative | 2815670 - 2815768 | 3362.04 |
| serine hydroxymethyltransferase | FGC38_RS13950 | Not Available | Negative | 2815808 - 2817061 | 45319.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





