Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfgg family protein | FGC38_RS13715 | Not Available | Positive | 2760844 - 2761035 | 7462.05 |
| glycine zipper 2tm domain-containing protein | FGC38_RS13720 | Not Available | Positive | 2761346 - 2761864 | 17706.1 |
| duf5384 family protein | FGC38_RS13725 | Not Available | Positive | 2761880 - 2762419 | 20231.4 |
| glutamine-hydrolyzing gmp synthase | FGC38_RS13730 | Not Available | Negative | 2762512 - 2764089 | 58682.6 |
| imp dehydrogenase | FGC38_RS13735 | Not Available | Negative | 2764158 - 2765624 | 52025.6 |
| exodeoxyribonuclease vii large subunit | FGC38_RS13740 | Not Available | Positive | 2765786 - 2767156 | 51835.3 |
| zinc ribbon domain-containing protein | FGC38_RS13745 | Not Available | Negative | 2767153 - 2767368 | 7994.73 |
| ribosome biogenesis gtpase der | FGC38_RS13750 | Not Available | Negative | 2767438 - 2768910 | 55039.1 |
| outer membrane protein assembly factor bamb | FGC38_RS13755 | Not Available | Negative | 2769028 - 2770206 | 41889.6 |
| ancillary secyeg translocon subunit yfgm | FGC38_RS13760 | Not Available | Negative | 2770217 - 2770837 | 22177.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





