Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neutral zinc metallopeptidase | FGC38_RS13570 | Not Available | Negative | 2727428 - 2728291 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | FGC38_RS13575 | Not Available | Negative | 2728459 - 2729172 | 26996.5 |
| outer membrane protein assembly factor bamc | FGC38_RS13580 | Not Available | Negative | 2729385 - 2730419 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | FGC38_RS13585 | Not Available | Negative | 2730436 - 2731314 | 31271.8 |
| glycine cleavage system transcriptional repressor | FGC38_RS13590 | Not Available | Positive | 2731460 - 2732032 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | FGC38_RS13595 | Not Available | Positive | 2732032 - 2732502 | 17634.9 |
| hydrogenase 4 subunit hyfa | FGC38_RS13600 | Not Available | Positive | 2732755 - 2733372 | 22155.5 |
| hydrogenase 4 subunit b | FGC38_RS13605 | Not Available | Positive | 2733372 - 2735390 | 72587.4 |
| hydrogenase 4 subunit hyfc | FGC38_RS13610 | Not Available | Positive | 2735401 - 2736348 | 34361.4 |
| hydrogenase 4 subunit hyfd | FGC38_RS13615 | Not Available | Positive | 2736365 - 2737804 | 51757.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





