Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose pyrophosphatase nudk | FGC38_RS13520 | Not Available | Negative | 2714457 - 2715032 | 21749.9 |
| formate-dependent uric acid utilization protein aega | FGC38_RS13525 | Not Available | Negative | 2715100 - 2717079 | 71848.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | FGC38_RS13530 | Not Available | Positive | 2717285 - 2718985 | 63700.7 |
| multidrug efflux rnd transporter permease acrd | FGC38_RS13535 | Not Available | Positive | 2719149 - 2722262 | 113054.0 |
| protein ypfm | FGC38_RS13540 | Not Available | Negative | 2722361 - 2722420 | 2408.02 |
| arsc family reductase | FGC38_RS13545 | Not Available | Positive | 2722801 - 2723157 | 13601.3 |
| succinyl-diaminopimelate desuccinylase | FGC38_RS13550 | Not Available | Positive | 2723161 - 2724288 | 41271.4 |
| ypfn family protein | FGC38_RS13555 | Not Available | Positive | 2724316 - 2724516 | 8071.78 |
| esterase | FGC38_RS13560 | Not Available | Negative | 2724626 - 2725324 | 24856.5 |
| trna cytosine(34) acetyltransferase tmca | FGC38_RS13565 | Not Available | Negative | 2725398 - 2727413 | 74896.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





