Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | FGC38_RS13225 | Not Available | Negative | 2657484 - 2658410 | 33905.1 |
| bile acid:sodium symporter family protein | FGC38_RS13230 | Not Available | Positive | 2658500 - 2659498 | 36407.8 |
| duf3820 family protein | FGC38_RS13235 | Not Available | Negative | 2659495 - 2659713 | 8415.57 |
| nad-dependent dna ligase liga | FGC38_RS13240 | Not Available | Negative | 2659715 - 2661730 | 73610.3 |
| cell division protein zipa | FGC38_RS13245 | Not Available | Negative | 2661801 - 2662787 | 36477.4 |
| sulfate transporter cysz | FGC38_RS13250 | Not Available | Positive | 2663017 - 2663778 | 29306.6 |
| cysteine synthase a | FGC38_RS13255 | Not Available | Positive | 2663963 - 2664934 | 34491.7 |
| phosphocarrier protein hpr | FGC38_RS13260 | Not Available | Positive | 2665318 - 2665575 | 9119.89 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | FGC38_RS13265 | Not Available | Positive | 2665620 - 2667347 | 63565.6 |
| pts glucose transporter subunit iia | FGC38_RS13270 | Not Available | Positive | 2667388 - 2667897 | 18252.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





