Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2502 domain-containing protein ypec | FGC38_RS13125 | Not Available | Positive | 2642555 - 2642881 | 13263.4 |
| nramp family divalent metal transporter | FGC38_RS13130 | Not Available | Negative | 2643022 - 2644260 | 44196.5 |
| nucleoside permease nupc | FGC38_RS13135 | Not Available | Positive | 2644596 - 2645798 | 43478.4 |
| is4-like element is421 family transposase | FGC38_RS13140 | Not Available | Positive | 2645885 - 2646997 | 40911.1 |
| sensor domain-containing phosphodiesterase | FGC38_RS13145 | Not Available | Negative | 2647197 - 2649386 | 83529.1 |
| Trna-ala | Not Available | Not Available | Positive | 2649595 - 2649670 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2649710 - 2649785 | Not Available |
| yfec-like transcriptional regulator | FGC38_RS13160 | Not Available | Positive | 2650006 - 2650365 | 13412.3 |
| merr family transcriptional regulator | FGC38_RS13165 | Not Available | Positive | 2650367 - 2650759 | 14911.0 |
| glutamate--trna ligase | FGC38_RS13170 | Not Available | Negative | 2650811 - 2652226 | 53818.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





