Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase ypda | FGC38_RS13075 | Not Available | Positive | 2630225 - 2631922 | 62661.3 |
| two-component system response regulator ypdb | FGC38_RS13080 | Not Available | Positive | 2631937 - 2632671 | 28722.6 |
| arac family transcriptional regulator | FGC38_RS13085 | Not Available | Positive | 2632684 - 2633541 | 32357.4 |
| phosphoenolpyruvate--protein phosphotransferase | FGC38_RS13090 | Not Available | Negative | 2633544 - 2636039 | 92135.3 |
| aminopeptidase | FGC38_RS13095 | Not Available | Negative | 2636064 - 2637101 | 37411.1 |
| aminopeptidase | FGC38_RS13100 | Not Available | Negative | 2637101 - 2638186 | 39626.3 |
| pts fructose transporter subunit iic | FGC38_RS13105 | Not Available | Negative | 2638201 - 2639448 | 43969.1 |
| pts fructose transporter subunit iib | FGC38_RS13110 | Not Available | Negative | 2639470 - 2639796 | 11736.0 |
| glucokinase | FGC38_RS13115 | Not Available | Negative | 2640015 - 2640980 | 34725.1 |
| ion channel protein | FGC38_RS13120 | Not Available | Positive | 2641184 - 2642440 | 43576.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





