Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | FGC38_RS12775 | Not Available | Negative | 2570496 - 2571674 | 40467.7 |
| beta-ketoacyl-acp synthase i | FGC38_RS12780 | Not Available | Negative | 2571939 - 2573159 | 42615.9 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | FGC38_RS12785 | Not Available | Positive | 2573318 - 2575324 | 74438.1 |
| yfcl family protein | FGC38_RS12790 | Not Available | Negative | 2575445 - 2575723 | 10000.6 |
| elongation factor p hydroxylase | FGC38_RS12795 | Not Available | Negative | 2575757 - 2576305 | 21146.6 |
| sulfite exporter taue/safe family protein | FGC38_RS12800 | Not Available | Negative | 2576305 - 2577114 | 28645.2 |
| penicillin-insensitive murein endopeptidase | FGC38_RS12805 | Not Available | Negative | 2577114 - 2577938 | 30138.4 |
| chorismate synthase | FGC38_RS12810 | Not Available | Negative | 2577942 - 2579027 | 39139.8 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | FGC38_RS12815 | Not Available | Negative | 2579062 - 2579994 | 35003.6 |
| endonuclease smrb | FGC38_RS12820 | Not Available | Positive | 2580160 - 2580711 | 21014.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





