Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isncy family transposase | FGC38_RS12375 | Not Available | Positive | 2488458 - 2489357 | 34924.8 |
| hypothetical protein | FGC38_RS12380 | Not Available | Positive | 2489358 - 2489555 | 7407.83 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | FGC38_RS12385 | Not Available | Negative | 2489596 - 2490399 | 28917.7 |
| mfs transporter | FGC38_RS12390 | Not Available | Negative | 2490417 - 2491706 | 46296.5 |
| l-rhamnonate dehydratase | FGC38_RS12395 | Not Available | Negative | 2491763 - 2492968 | 44229.0 |
| iclr family transcriptional regulator | FGC38_RS12400 | Not Available | Negative | 2492983 - 2493765 | 28905.8 |
| nicotinamide mononucleotide deamidase-related protein yfay | FGC38_RS12405 | Not Available | Negative | 2493985 - 2495187 | 44228.2 |
| yfaz family protein | FGC38_RS12410 | Not Available | Negative | 2495287 - 2495829 | 18610.8 |
| nucleoside triphosphatase nudi | FGC38_RS12415 | Not Available | Positive | 2496108 - 2496533 | 16371.6 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase ais | FGC38_RS12420 | Not Available | Negative | 2496572 - 2497174 | 22257.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





