Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25 | FGC38_RS12090 | Not Available | Positive | 2414071 - 2414355 | 10694.0 |
| nucleoid-associated protein yejk | FGC38_RS12095 | Not Available | Negative | 2414494 - 2415501 | 37824.6 |
| yejl family protein | FGC38_RS12100 | Not Available | Positive | 2415683 - 2415910 | 8288.95 |
| lps biosynthesis-modulating metalloenzyme yejm | FGC38_RS12105 | Not Available | Positive | 2415930 - 2417690 | 67299.8 |
| Trna-pro | Not Available | Not Available | Positive | 2417765 - 2417841 | Not Available |
| hypothetical protein | FGC38_RS12115 | Not Available | Negative | 2417944 - 2420475 | 89194.7 |
| is5-like element is5 family transposase | FGC38_RS12120 | Not Available | Negative | 2420619 - 2421599 | 37853.6 |
| nitrate/nitrite response regulator protein narp | FGC38_RS12125 | Not Available | Positive | 2422054 - 2422701 | 23576.4 |
| cytochrome c-type biogenesis thiol:disulfide oxidoreductase ccmh | FGC38_RS12130 | Not Available | Negative | 2422912 - 2423964 | 39091.3 |
| thiol:disulfide interchange protein dsbe | FGC38_RS12135 | Not Available | Negative | 2423961 - 2424518 | 20810.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





