Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | FGC38_RS12040 | Not Available | Positive | 2401533 - 2402099 | 21041.1 |
| cyclic di-gmp phosphodiesterase | FGC38_RS12045 | Not Available | Positive | 2402280 - 2403836 | 58591.5 |
| extracellular solute-binding protein | FGC38_RS12050 | Not Available | Positive | 2403918 - 2405732 | 69672.6 |
| microcin c abc transporter permease yejb | FGC38_RS12055 | Not Available | Positive | 2405733 - 2406827 | 40362.6 |
| abc transporter permease | FGC38_RS12060 | Not Available | Positive | 2406827 - 2407852 | 38093.7 |
| microcin c abc transporter atp-binding protein yejf | FGC38_RS12065 | Not Available | Positive | 2407854 - 2409443 | 58729.8 |
| yejg family protein | FGC38_RS12070 | Not Available | Negative | 2409447 - 2409791 | 12525.9 |
| multidrug efflux mfs transporter bcr | FGC38_RS12075 | Not Available | Negative | 2410124 - 2411314 | 43355.4 |
| 16s rrna pseudouridine(516) synthase rsua | FGC38_RS12080 | Not Available | Negative | 2411342 - 2412037 | 25866.8 |
| dead/deah box helicase | FGC38_RS12085 | Not Available | Positive | 2412186 - 2413946 | 66416.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





