Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | FGC38_RS11840 | Not Available | Positive | 2357355 - 2357933 | 21445.9 |
| sdr family oxidoreductase | FGC38_RS11845 | Not Available | Negative | 2358063 - 2358824 | 26952.4 |
| hypothetical protein | FGC38_RS11850 | Not Available | Negative | 2358877 - 2360312 | 52626.5 |
| small membrane protein yohp | FGC38_RS11855 | Not Available | Positive | 2360536 - 2360619 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | FGC38_RS11860 | Not Available | Negative | 2360992 - 2361939 | 35201.5 |
| cida/lrga family protein | FGC38_RS11865 | Not Available | Positive | 2362178 - 2362576 | 14579.6 |
| cidb/lrgb family autolysis modulator | FGC38_RS11870 | Not Available | Positive | 2362573 - 2363268 | 24471.1 |
| cytidine deaminase | FGC38_RS11875 | Not Available | Positive | 2363398 - 2364282 | 31541.6 |
| outer membrane permeability protein sana | FGC38_RS11880 | Not Available | Positive | 2364432 - 2365151 | 27288.5 |
| duf2542 family protein | FGC38_RS11885 | Not Available | Positive | 2365154 - 2365393 | 9264.61 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





