Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | FGC38_RS11485 | Not Available | Negative | 2273868 - 2274509 | 24354.6 |
| diguanylate cyclase | FGC38_RS11490 | Not Available | Positive | 2274827 - 2278144 | 123894.0 |
| dna-3-methyladenine glycosylase 2 | FGC38_RS11495 | Not Available | Negative | 2278253 - 2279101 | 31395.0 |
| molecular chaperone | FGC38_RS11500 | Not Available | Positive | 2279235 - 2280587 | 49374.2 |
| protein kinase yegi | FGC38_RS11505 | Not Available | Negative | 2280600 - 2282546 | 71642.9 |
| yegj family protein | FGC38_RS11510 | Not Available | Positive | 2282746 - 2283207 | 17428.8 |
| protein-serine/threonine phosphatase pphc | FGC38_RS11515 | Not Available | Negative | 2283272 - 2284033 | 27209.5 |
| vwa domain-containing protein | FGC38_RS11520 | Not Available | Negative | 2284030 - 2284689 | 24219.0 |
| type i toxin-antitoxin system toxin ibsa | FGC38_RS11525 | Not Available | Negative | 2284910 - 2284969 | 2232.03 |
| type i toxin-antitoxin system ibs family toxin | FGC38_RS11530 | Not Available | Negative | 2285242 - 2285298 | 2063.86 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





