Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps o-antigen chain length determinant protein wzzb | FGC38_RS11285 | Not Available | Negative | 2228882 - 2229862 | 36456.9 |
| udp-glucose 6-dehydrogenase | FGC38_RS11290 | Not Available | Negative | 2230008 - 2231174 | 43659.3 |
| nadp-dependent phosphogluconate dehydrogenase | FGC38_RS11295 | Not Available | Negative | 2231423 - 2232829 | 51484.1 |
| hypothetical protein | FGC38_RS11300 | Not Available | Negative | 2232957 - 2233310 | 13914.7 |
| is5-like element is5 family transposase | FGC38_RS11305 | Not Available | Negative | 2233456 - 2234436 | 37853.6 |
| hypothetical protein | FGC38_RS11310 | Not Available | Negative | 2234507 - 2234950 | 17278.8 |
| glycosyltransferase family 4 protein | FGC38_RS11315 | Not Available | Negative | 2234952 - 2236070 | 43190.4 |
| daph/dapd/glmu-related protein | FGC38_RS11320 | Not Available | Negative | 2236055 - 2236645 | 21676.4 |
| beta-1,6-galactofuranosyltransferase | FGC38_RS11325 | Not Available | Negative | 2236626 - 2237618 | 37759.3 |
| o16 family o-antigen polymerase | FGC38_RS11330 | Not Available | Negative | 2237621 - 2238787 | 44746.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





