Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yoeb-yefm toxin-antitoxin system antitoxin yefm | FGC38_RS11235 | Not Available | Negative | 2221023 - 2221274 | 9308.13 |
| his operon leader peptide | FGC38_RS11240 | Not Available | Positive | 2221557 - 2221607 | 2081.43 |
| atp phosphoribosyltransferase | FGC38_RS11245 | Not Available | Positive | 2221753 - 2222652 | 33368.8 |
| histidinol dehydrogenase | FGC38_RS11250 | Not Available | Positive | 2222658 - 2223962 | 46112.9 |
| histidinol-phosphate transaminase | FGC38_RS11255 | Not Available | Positive | 2223959 - 2225029 | 39362.3 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | FGC38_RS11260 | Not Available | Positive | 2225029 - 2226096 | 40280.3 |
| imidazole glycerol phosphate synthase subunit hish | FGC38_RS11265 | Not Available | Positive | 2226096 - 2226686 | 21654.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | FGC38_RS11270 | Not Available | Positive | 2226686 - 2227423 | 26034.2 |
| imidazole glycerol phosphate synthase subunit hisf | FGC38_RS11275 | Not Available | Positive | 2227405 - 2228181 | 28456.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | FGC38_RS11280 | Not Available | Positive | 2228175 - 2228786 | 22757.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





