Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | FGC38_RS11025 | Not Available | Positive | 2186622 - 2188076 | 53997.9 |
| yebc/pmpr family dna-binding transcriptional regulator | FGC38_RS11030 | Not Available | Positive | 2188419 - 2189135 | 25868.5 |
| Trna-asn | Not Available | Not Available | Positive | 2189588 - 2189663 | Not Available |
| toxic metabolite efflux mate transporter yeeo | FGC38_RS11040 | Not Available | Negative | 2189764 - 2191251 | 54201.8 |
| Trna-asn | Not Available | Not Available | Positive | 2191412 - 2191487 | Not Available |
| hth-type transcriptional regulator cbl | FGC38_RS11050 | Not Available | Negative | 2191525 - 2192475 | 35858.0 |
| nitrogen assimilation transcriptional regulator nac | FGC38_RS11055 | Not Available | Negative | 2192577 - 2193494 | 32837.0 |
| Trna-asn | Not Available | Not Available | Positive | 2193821 - 2193896 | Not Available |
| l,d-transpeptidase | FGC38_RS11065 | Not Available | Negative | 2193952 - 2194887 | 34544.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | FGC38_RS11070 | Not Available | Negative | 2194949 - 2196028 | 36989.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





