Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | FGC38_RS08900 | Not Available | Negative | 1778270 - 1778548 | 11140.2 |
| protein rem | FGC38_RS08905 | Not Available | Negative | 1778615 - 1778866 | 9235.26 |
| Host killer protein | FGC38_RS08910 | Not Available | Negative | 1779083 - 1779238 | 5737.24 |
| type ii toxin-antitoxin system mrna interferase rele | FGC38_RS08915 | Not Available | Negative | 1779310 - 1779597 | 11225.8 |
| type ii toxin-antitoxin system antitoxin relb | FGC38_RS08920 | Not Available | Negative | 1779597 - 1779836 | 9072.01 |
| protein ydfv | FGC38_RS08925 | Not Available | Positive | 1779861 - 1780166 | 11308.8 |
| flxa-like family protein | FGC38_RS08930 | Not Available | Positive | 1780369 - 1780701 | 12208.4 |
| protein ydfw | FGC38_RS08935 | Not Available | Negative | 1781138 - 1781287 | 5881.1 |
| protein ydfx | FGC38_RS08940 | Not Available | Negative | 1781322 - 1781600 | 10717.0 |
| Putative cro anti-repressor | FGC38_RS08945 | Not Available | Negative | 1781584 - 1781814 | 8578.22 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





