Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde-3-phosphate dehydrogenase | FGC38_RS10020 | Not Available | Positive | 1996456 - 1997451 | 35534.5 |
| d-hexose-6-phosphate mutarotase | FGC38_RS10025 | Not Available | Positive | 1997535 - 1998419 | 32667.8 |
| methylglyoxal reductase yeae | FGC38_RS10030 | Not Available | Negative | 1998467 - 1999321 | 30988.4 |
| scaffolding protein mipa | FGC38_RS10035 | Not Available | Negative | 1999411 - 2000157 | 27832.4 |
| protein kinase yeag | FGC38_RS10040 | Not Available | Positive | 2000593 - 2002527 | 74484.3 |
| yeah/yhbh family protein | FGC38_RS10045 | Not Available | Positive | 2002640 - 2003923 | 49395.2 |
| ggdef domain-containing protein | FGC38_RS10050 | Not Available | Positive | 2004070 - 2005545 | 56104.7 |
| diguanylate cyclase dgcj | FGC38_RS10055 | Not Available | Positive | 2005726 - 2007216 | 56605.8 |
| mischarged aminoacyl-trna deacylase | FGC38_RS10060 | Not Available | Positive | 2007259 - 2007762 | 17851.7 |
| small membrane protein yoai | FGC38_RS10065 | Not Available | Negative | 2007763 - 2007867 | 3771.77 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





