Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage-tail assembly-like protein | FGC38_RS08855 | Not Available | Negative | 1772994 - 1773491 | 18310.8 |
| Endolysin | FGC38_RS08860 | Not Available | Negative | 1773488 - 1774021 | 19663.6 |
| Hypothetical protein | FGC38_RS08865 | Not Available | Negative | 1774018 - 1774329 | 12091.3 |
| Holin protein | FGC38_RS08870 | Not Available | Negative | 1774334 - 1774549 | 7741.44 |
| putative zinc-binding protein ynfu | FGC38_RS23520 | Not Available | Positive | 1774769 - 1774939 | 6371.7 |
| Csp | FGC38_RS08875 | Not Available | Negative | 1775303 - 1775518 | 7717.12 |
| cold shock-like protein cspf | FGC38_RS08880 | Not Available | Positive | 1775819 - 1776031 | 7563.18 |
| hypothetical protein | FGC38_RS08885 | Not Available | Positive | 1776086 - 1776175 | 3193.12 |
| Antitermination protein q | FGC38_RS08890 | Not Available | Negative | 1776453 - 1777205 | 27927.8 |
| Hypothetical protein | FGC38_RS08895 | Not Available | Negative | 1777219 - 1778268 | 39277.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





