Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydil family protein | FGC38_RS09570 | Not Available | Positive | 1904579 - 1904935 | 13929.7 |
| mfs transporter | FGC38_RS09575 | Not Available | Positive | 1905035 - 1906249 | 44610.7 |
| mfs transporter | FGC38_RS09580 | Not Available | Positive | 1906476 - 1907741 | 46083.0 |
| quinate/shikimate dehydrogenase | FGC38_RS09585 | Not Available | Positive | 1907753 - 1908619 | 31229.6 |
| type i 3-dehydroquinate dehydratase | FGC38_RS09590 | Not Available | Positive | 1908650 - 1909408 | 27468.2 |
| acyl coa:acetate/3-ketoacid coa transferase | FGC38_RS09595 | Not Available | Positive | 1909551 - 1911146 | 57581.8 |
| acyl-coa dehydrogenase | FGC38_RS09600 | Not Available | Positive | 1911160 - 1912311 | 42974.6 |
| arac family transcriptional regulator | FGC38_RS09605 | Not Available | Negative | 1912354 - 1913265 | 34896.2 |
| electron transfer flavoprotein | FGC38_RS09610 | Not Available | Positive | 1913581 - 1914345 | 27472.0 |
| electron transfer flavoprotein subunit alpha | FGC38_RS09615 | Not Available | Positive | 1914365 - 1915303 | 33771.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





