Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | FGC38_RS09075 | Not Available | Negative | 1802663 - 1803556 | 33283.4 |
| mfs transporter | FGC38_RS09080 | Not Available | Positive | 1803663 - 1804916 | 45260.2 |
| kpn_01571 family protein | FGC38_RS23940 | Not Available | Negative | 1804965 - 1805084 | 4369.63 |
| acid resistance repetitive basic protein asr | FGC38_RS09085 | Not Available | Positive | 1805340 - 1805648 | 10591.8 |
| stationary phase-induced protein | FGC38_RS09090 | Not Available | Positive | 1805741 - 1805824 | 3236.23 |
| trypsin-like serine peptidase | FGC38_RS09095 | Not Available | Positive | 1805924 - 1806745 | 29278.6 |
| multidrug/spermidine efflux smr transporter subunit mdti | FGC38_RS09100 | Not Available | Negative | 1806784 - 1807113 | 11720.8 |
| multidrug/spermidine efflux smr transporter subunit mdtj | FGC38_RS09105 | Not Available | Negative | 1807100 - 1807465 | 13115.7 |
| ai-2 transporter tqsa | FGC38_RS09115 | Not Available | Positive | 1807877 - 1808911 | 37545.3 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | FGC38_RS09120 | Not Available | Negative | 1808936 - 1810324 | 48726.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





