Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagaturonate reductase | FGC38_RS08670 | Not Available | Negative | 1743193 - 1744644 | 54811.3 |
| hypothetical protein | FGC38_RS08675 | Not Available | Negative | 1744871 - 1745857 | 35723.9 |
| duf4186 domain-containing protein | FGC38_RS08680 | Not Available | Negative | 1745930 - 1746289 | 13544.5 |
| glutaminase b | FGC38_RS08685 | Not Available | Negative | 1746289 - 1747215 | 33517.6 |
| succinate-semialdehyde dehydrogenase | FGC38_RS08690 | Not Available | Negative | 1747279 - 1748667 | 49720.7 |
| putrescine utilization regulator ptrr | FGC38_RS08695 | Not Available | Positive | 1748768 - 1749649 | 32484.9 |
| putative protein ynek | FGC38_RS08700 | Not Available | Positive | 1749727 - 1750842 | 42843.6 |
| l-arabinose mfs transporter | FGC38_RS08705 | Not Available | Positive | 1750992 - 1752182 | 42540.8 |
| naat family transporter marc | FGC38_RS08710 | Not Available | Negative | 1752207 - 1752872 | 23618.7 |
| multiple antibiotic resistance transcriptional regulator marr | FGC38_RS08715 | Not Available | Positive | 1753084 - 1753518 | 16066.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





