Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm-dependent modulation protein | FGC38_RS08465 | Not Available | Negative | 1690029 - 1690244 | 7987.26 |
| peroxiredoxin osmc | FGC38_RS08470 | Not Available | Positive | 1690589 - 1691020 | 15089.0 |
| abc transporter atp-binding protein | FGC38_RS08475 | Not Available | Negative | 1691076 - 1692002 | 34623.1 |
| abc transporter atp-binding protein | FGC38_RS08480 | Not Available | Negative | 1691995 - 1692981 | 36102.1 |
| d,d-dipeptide abc transporter permease | FGC38_RS08485 | Not Available | Negative | 1692978 - 1693874 | 31972.9 |
| abc transporter permease | FGC38_RS08490 | Not Available | Negative | 1693871 - 1694893 | 37347.3 |
| abc transporter substrate-binding protein | FGC38_RS08495 | Not Available | Negative | 1694895 - 1696445 | 57644.2 |
| d-alanyl-d-alanine dipeptidase | FGC38_RS08500 | Not Available | Negative | 1696459 - 1697040 | 21214.2 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase dosp | FGC38_RS08505 | Not Available | Negative | 1697298 - 1699697 | 90265.6 |
| diguanylate cyclase dosc | FGC38_RS08510 | Not Available | Negative | 1699722 - 1701104 | 53180.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





