Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FGC38_RS08205 | Not Available | Negative | 1637188 - 1637613 | 16449.9 |
| rna-guided endonuclease insq/tnpb family protein | FGC38_RS08210 | Not Available | Positive | 1637621 - 1638829 | 45743.1 |
| bene family transporter ydco | FGC38_RS08215 | Not Available | Negative | 1638869 - 1640083 | 42117.8 |
| dna-binding transcriptional regulator sutr | FGC38_RS08220 | Not Available | Positive | 1640136 - 1640672 | 19732.4 |
| 23s rrna 5-hydroxycytidine c2501 synthase | FGC38_RS08225 | Not Available | Positive | 1640745 - 1642706 | 72705.9 |
| yncj family protein | FGC38_RS08230 | Not Available | Negative | 1642798 - 1643028 | 8709.32 |
| type ii toxin-antitoxin system mrna interferase toxin hica | FGC38_RS08235 | Not Available | Positive | 1643250 - 1643426 | 6782.3 |
| type ii toxin-antitoxin system antitoxin hicb | FGC38_RS08240 | Not Available | Positive | 1643472 - 1643888 | 15247.5 |
| plp-dependent aminotransferase family protein | FGC38_RS08245 | Not Available | Positive | 1643967 - 1645373 | 52795.8 |
| putative abc transporter substrate-binding protein ydcs | FGC38_RS08250 | Not Available | Positive | 1645618 - 1646763 | 42297.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





