Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2/dual specificity phosphatase family protein | FGC38_RS08110 | Not Available | Positive | 1614849 - 1616165 | 50547.6 |
| fmn-dependent nadh-azoreductase | FGC38_RS08115 | Not Available | Negative | 1616219 - 1616824 | 21658.9 |
| atp-dependent rna helicase hrpa | FGC38_RS08120 | Not Available | Positive | 1617025 - 1620927 | 149036.0 |
| duf218 domain-containing protein ydcf | FGC38_RS08125 | Not Available | Positive | 1621199 - 1621999 | 29707.4 |
| aldehyde dehydrogenase | FGC38_RS08130 | Not Available | Positive | 1622196 - 1623635 | 52275.8 |
| hypothetical protein | FGC38_RS08135 | Not Available | Negative | 1623677 - 1624677 | 35326.0 |
| cytochrome b561 | FGC38_RS08140 | Not Available | Positive | 1624866 - 1625396 | 20287.7 |
| periplasmic protein | FGC38_RS08145 | Not Available | Positive | 1625641 - 1625814 | 5860.19 |
| protein yncp | FGC38_RS23510 | Not Available | Positive | 1625840 - 1625908 | 2400.13 |
| type i toxin-antitoxin system toxin hokb | FGC38_RS08150 | Not Available | Negative | 1625886 - 1626035 | 5626.16 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





