Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail assembly chaperone | FGC38_RS23930 | Not Available | Positive | 1560052 - 1560252 | 7612.19 |
| Tail length tape measure protein | FGC38_RS07875 | Not Available | Positive | 1560418 - 1561350 | 33970.4 |
| Putative outer membrane protein lom precursor | FGC38_RS07880 | Not Available | Positive | 1561353 - 1561568 | 8438.77 |
| hypothetical protein | FGC38_RS23935 | Not Available | Negative | 1561480 - 1561728 | 9175.12 |
| Transposase insh, is5d, is5 family | FGC38_RS07885 | Not Available | Negative | 1561710 - 1562690 | 37779.6 |
| Outer membrane protein lom precursor | FGC38_RS07890 | Not Available | Positive | 1562760 - 1562948 | 6543.43 |
| Side tail fiber | FGC38_RS07895 | Not Available | Positive | 1563013 - 1566375 | 113786.0 |
| Qin prophage | FGC38_RS07900 | Not Available | Positive | 1566375 - 1566950 | 21337.9 |
| Recombinase family protein | FGC38_RS07905 | Not Available | Negative | 1567048 - 1567638 | 21909.8 |
| Hypothetical protein | FGC38_RS07910 | Not Available | Negative | 1567955 - 1568188 | 8751.71 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





