Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydbh family protein | FGC38_RS07950 | Not Available | Positive | 1577015 - 1579654 | 96840.2 |
| ynbe family lipoprotein | FGC38_RS07955 | Not Available | Positive | 1579651 - 1579836 | 6840.53 |
| ydbl family protein | FGC38_RS07960 | Not Available | Positive | 1579844 - 1580170 | 11878.5 |
| transcriptional regulator fear | FGC38_RS07965 | Not Available | Negative | 1580342 - 1581247 | 34622.3 |
| phenylacetaldehyde dehydrogenase | FGC38_RS07970 | Not Available | Positive | 1581483 - 1582982 | 53702.1 |
| primary-amine oxidase | FGC38_RS07975 | Not Available | Negative | 1583040 - 1585313 | 84383.2 |
| phenylacetic acid degradation bifunctional protein paaz | FGC38_RS07980 | Not Available | Negative | 1585561 - 1587606 | 73006.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | FGC38_RS07985 | Not Available | Positive | 1587891 - 1588820 | 35501.2 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | FGC38_RS07990 | Not Available | Positive | 1588832 - 1589119 | 10942.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paac | FGC38_RS07995 | Not Available | Positive | 1589128 - 1589874 | 27879.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





