Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | BE104 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator rssb | FGC38_RS07165 | Not Available | Positive | 1425405 - 1426418 | 37304.5 |
| utp--glucose-1-phosphate uridylyltransferase galu | FGC38_RS07170 | Not Available | Positive | 1426620 - 1427528 | 32944.2 |
| histone-like nucleoid-structuring protein h-ns | FGC38_RS07175 | Not Available | Negative | 1427672 - 1428085 | 15540.5 |
| thymidine kinase | FGC38_RS07180 | Not Available | Positive | 1428690 - 1429307 | 23457.9 |
| hypothetical protein | FGC38_RS07185 | Not Available | Negative | 1429589 - 1430485 | 33411.3 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | FGC38_RS07190 | Not Available | Negative | 1430609 - 1433284 | 96132.5 |
| protein ycht | FGC38_RS23495 | Not Available | Positive | 1433677 - 1433730 | 1882.42 |
| naat family transporter yche | FGC38_RS07195 | Not Available | Positive | 1433761 - 1434408 | 23522.7 |
| hypothetical protein | FGC38_RS23380 | Not Available | Negative | 1434566 - 1434862 | 11299.6 |
| oligopeptide abc transporter substrate-binding protein oppa | FGC38_RS07200 | Not Available | Positive | 1435146 - 1436777 | 60951.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





